PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1178580.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 193aa    MW: 21640.6 Da    PI: 5.638
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1178580.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.44.1e-30103161159
                        ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                        +dDg++WrKYG+K+vk+s++pr+YY+C+s gC+vkk+ver++ed ++v++tY g Hnhe
  Pd.00g1178580.m01 103 MDDGFKWRKYGKKSVKNSPNPRNYYKCSSGGCNVKKRVERDREDSSYVITTYDGVHNHE 161
                        59********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MDCLQNPNPS SAGPYHFGES IDPSMDFDEF SDYFMLDCGD DDHQDSSSLS TVSPEKFRAD  60
CSTGSSGGAT SRNSDNNINE GRRNKIEMGH RVAFRTKSEL EVMDDGFKWR KYGKKSVKNS  120
PNPRNYYKCS SGGCNVKKRV ERDREDSSYV ITTYDGVHNH ESPCVVYYNQ MPPPVDPNNI  180
WTLRASSQSS ASS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.11e-54WRKY family protein