PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1178980.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 247aa MW: 28876.9 Da PI: 7.4752

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1178980.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.8	7.9e-16	12	59	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ll ++ +G g W+ ++ + g++R++k+c++rw++yl Pd.00g1178980.m01 12 KGAWTKEEDDLLRLFIQNHGEGKWNQVSLHSGLKRCRKSCRLRWLNYL 59 79********************************************97 PP
2	Myb_DNA-binding	44	5e-14	65	108	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg + ++E +l+++++k+lG++ W++Ia +++ gRt++++k++w++ Pd.00g1178980.m01 65 RGHFAEDEIDLILRLHKLLGNR-WSLIAGRLP-GRTANDVKNFWNT 108 678899**************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence
MYEMDSSLGV RKGAWTKEED DLLRLFIQNH GEGKWNQVSL HSGLKRCRKS CRLRWLNYLK 60 PSIKRGHFAE DEIDLILRLH KLLGNRWSLI AGRLPGRTAN DVKNFWNTRL GIKMVSVVVE 120 KVKEKSPETK KDIAVRPQSR RLSKTSHYLS GHKTVTSRHN QPEENFSKLP ILPSSPIEDE 180 VDWWETLLED EDNVQRTKCS CLLLEEDHFT NCCVEDFAQW TITDFRYLED CPCWIGSSDM 240 DLWNLST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	3e-53	MYB family protein