PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1178990.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 243aa MW: 28379.9 Da PI: 10.0468

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1178990.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.8	2.5e-18	11	58	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEdell ++++q+G g W+ ++++ g++R++k+c++rw++yl Pd.00g1178990.m01 11 KGAWTREEDELLRQYIQQYGEGKWHQVSHKAGLNRCRKSCRLRWLNYL 58 79********************************************97 PP
2	Myb_DNA-binding	41	4.3e-13	64	106	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg +T++E +l v++ k+lG++ W++Ia +++ gRt +++k++w Pd.00g1178990.m01 64 RGDFTEDEVDLMVRLRKLLGNR-WSLIAGRLP-GRTSNDVKNYWS 106 899*****************.*****.*********5 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MEGNNLLRVR KGAWTREEDE LLRQYIQQYG EGKWHQVSHK AGLNRCRKSC RLRWLNYLSP 60 NIKRGDFTED EVDLMVRLRK LLGNRWSLIA GRLPGRTSND VKNYWSTRQR KNKSSRAEKD 120 KTLETTKTVI LRPQPRTFSK KSYFFSSPAP TLQHIQLKEN FNWPLPSSPP IENGIDEWKS 180 QLADTNSVER AMCSGFQLEE DFFTNFWVEN IAQNTGTGVN SADEGLLSNS DFSFHLWNFS 240 KEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	8e-59	MYB family protein