PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1179010.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 87aa    MW: 10363.9 Da    PI: 10.4511
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1179010.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.31.7e-181158148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
    Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                       +g+WT eEdell ++++q+G g W+ ++ + g++R++k+c++rw++yl
  Pd.00g1179010.m01 11 KGAWTGEEDELLRQYIQQHGEGKWHQVSLKAGLNRCRKSCRLRWLNYL 58
                       79*********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 87 aa     Download sequence    
MEGNNLLRVR KGAWTGEEDE LLRQYIQQHG EGKWHQVSLK AGLNRCRKSC RLRWLNYLRP  60
NIRTGDFTED EVDLMVRLRK LLGNRQV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.12e-35MYB family protein