PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1180700.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 184aa    MW: 21053.2 Da    PI: 9.1512
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1180700.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.31.5e-1289130446
                        S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
    Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                        W ++++ ll++a +++G g+W+ +a+++g +++ +qc++++ +
  Pd.00g1180700.m01  89 WNADDEILLLEATEMYGLGNWAEVAEHVG-TKSKEQCIEHYTN 130
                        *****************************.***********88 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MMTAKTGTYH WMAPEVLAFI TEPTSISPPL ACSASLRKKL SGLRVQNFSA KIKEKKECIH  60
WRKIRIFSSR RRSKSSVDNL SFPLICPDWN ADDEILLLEA TEMYGLGNWA EVAEHVGTKS  120
KEQCIEHYTN VYLNSQRFPI PDMSHVEGKN RKELLAMAKG HGEDKKEATR FAYQFVQRSP  180
VADY