PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1184730.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 473aa MW: 51667.6 Da PI: 5.0381

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1184730.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	56.6	8.6e-18	36	110	46	128
NAM 46 dLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 dL fFsk d k+++ +r nr+t++gy k+tgk +e++++ +++++g k++L f +gr p+++kt+ vmhey+l Pd.00g1184730.m01 36 DL---------PAVFFSKPDYKNSKRDRCNRTTDEGYFKSTGKVREIKTEqSQAVIGKKRILPFCEGRGPQAKKTKYVMHEYSL 110 22.........358********************************98456669************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MSEFLDLESQ DGVRMPWNVI PGTKQESTNS VREPRDLPAV FFSKPDYKNS KRDRCNRTTD 60 EGYFKSTGKV REIKTEQSQA VIGKKRILPF CEGRGPQAKK TKYVMHEYSL TKTGLEKLGV 120 GPNPNQKEEF VLCCLKNESA NSKKLKDVSI CGNELAEPAI GGEIASNAED DHAAATDMIQ 180 GPDEHLTDKD VLLGTDNCNE CAESESLNGF SPTDKNDIST CVGSPGSFDV PGGFFLSDFD 240 DLFKELSCAD LGENMDSTFL PPEQLAATSA TTPTSAILFG GFGVGSPDGF LLSDIDDLLK 300 KPFCADQPHQ PPHPPLPHQP PPAPQSHQPP SPPLTAIWFL TAAVLSSAFF ICPPTKSLAT 360 PTKPEMDLLL MEKTLLGLFI AVIVAITISK FRGKRFKLPP GPMPVPVFGN WLQVGDDLNH 420 RNLTDLAKKF GDIFLLRMGS GLKLEENGGC VYGSAGSLLQ ESRFGWRWQD QRS

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MSEFLDLESQ DGVRMPWNVI PGTKQESTNS VREPRDLPAV FFSKPDYKNS KRDRCNRTTD  60
EGYFKSTGKV REIKTEQSQA VIGKKRILPF CEGRGPQAKK TKYVMHEYSL TKTGLEKLGV  120
GPNPNQKEEF VLCCLKNESA NSKKLKDVSI CGNELAEPAI GGEIASNAED DHAAATDMIQ  180
GPDEHLTDKD VLLGTDNCNE CAESESLNGF SPTDKNDIST CVGSPGSFDV PGGFFLSDFD  240
DLFKELSCAD LGENMDSTFL PPEQLAATSA TTPTSAILFG GFGVGSPDGF LLSDIDDLLK  300
KPFCADQPHQ PPHPPLPHQP PPAPQSHQPP SPPLTAIWFL TAAVLSSAFF ICPPTKSLAT  360
PTKPEMDLLL MEKTLLGLFI AVIVAITISK FRGKRFKLPP GPMPVPVFGN WLQVGDDLNH  420
RNLTDLAKKF GDIFLLRMGS GLKLEENGGC VYGSAGSLLQ ESRFGWRWQD QRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	4e-18	NAC family protein