PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1186340.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 607aa    MW: 69498.9 Da    PI: 9.8156
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1186340.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B360.62.7e-19641451199
                        HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                 B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                        + s+rl++p kf+e+++g+  + ++  l+ +s + W+vkl  + + ++ ++++GW++Fvk++ L++gD +vF+++g+s+f  +vk++++
  Pd.00g1186340.m01  64 F-SQRLRIPPKFIENFNGQ--SLRKCALRGPSRQWWDVKL--EERENSLFFRDGWQGFVKDHVLEVGDLLVFSYNGKSKF--KVKIYDR 145
                        4.467********999888..4568***************..********************************998999..9999987 PP
2B337.73.7e-122403111488
                        T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
                 B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                         r+++p++ a + g+  +    ++l+d++grsW v+l+   +++r  ++ GW e  kan++  gD+++F+l++++
  Pd.00g1186340.m01 240 YRVTIPNELAVAEGLRRRD--AVMLQDPTGRSWLVELR-VESRNRLDMAIGWTECRKANQISPGDSIIFELVKQE 311
                        4789******999988544..7***************5.4555669999*********************98754 PP
3B350.53.8e-16328415197
                        EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                        ffkvl     + ++ l+lp  f+e+ +g++  + +  l+ ++g+ W+v+l  + + +++++ +GW++F++++ L+ g f+vF +dg+s+f  
  Pd.00g1186340.m01 328 FFKVL--LGDFYQN-LRLPPVFIEKLDGQS-LP-KCALRGPNGKLWTVEL--EERENGFFFHDGWQGFARDHCLEIGNFLVFDYDGDSKF-- 410
                        56666..5555555.9**********8873.44.89**************..**********************************9999.. PP

                        EEEEE CS
                 B3  93 vvkvf 97 
                         v+++
  Pd.00g1186340.m01 411 DVTIY 415
                        66655 PP
4B350.92.8e-165085851696
                        EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEET.TEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                 B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkks.gryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                        +++pk+ a + g++  ++kt++l+d+ grsW vkl++ +++ +r+ +tkGW + ++an++ +gD++vF++++ s   + +++
  Pd.00g1186340.m01 508 VTIPKELAIAEGLV--RKKTVKLQDPAGRSWIVKLRVHRSPyQRFDMTKGWAKCCRANQISQGDTIVFEFVKPSV--MQIHI 585
                        589*****999999..6779***************985555156*************************876433..35555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 607 aa     Download sequence    
MAEARKQVKV RTAKQDQSLK YLNLWQQNSE NKTWLVLLTK IQMARPRKRS PKKPSFFKIL  60
IGDFSQRLRI PPKFIENFNG QSLRKCALRG PSRQWWDVKL EERENSLFFR DGWQGFVKDH  120
VLEVGDLLVF SYNGKSKFKV KIYDRSACEK NVEVAERRSG SPVPLVNKGN QAQVKDEIVE  180
LDSEDCENKT IDSDRRSCKY PISEKRPVSF CVQETSTGSI LFKSENPCFL VCSMKQHLLY  240
RVTIPNELAV AEGLRRRDAV MLQDPTGRSW LVELRVESRN RLDMAIGWTE CRKANQISPG  300
DSIIFELVKQ EAQMARKPSK PSLKKQSFFK VLLGDFYQNL RLPPVFIEKL DGQSLPKCAL  360
RGPNGKLWTV ELEERENGFF FHDGWQGFAR DHCLEIGNFL VFDYDGDSKF DVTIYEPTGC  420
EKDVEAAKRR NGNPVSSVKD EIVDIETENY NKESKSKTIN AERTSRKYVM SGKRPANDCV  480
EETSTGSILF KSENSCFIKI LTNILYPVTI PKELAIAEGL VRKKTVKLQD PAGRSWIVKL  540
RVHRSPYQRF DMTKGWAKCC RANQISQGDT IVFEFVKPSV MQIHIYRGGR VGGSGCSVVL  600
VNPGLKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.12e-26B3 family protein