PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1186350.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 301aa    MW: 34336.4 Da    PI: 9.2543
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1186350.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.26.2e-1815104199
                        EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                        ffk+l     ++++ l++p  f+++++g   + ++ +l+ +sg+   v+l  + + ++ +++kGW++Fvk+++L++g f+vF++dg+s+f  
  Pd.00g1186350.m01  15 FFKIL--LGDFSKH-LRIPPAFIKKFNGG--SLRKCSLRGPSGKWRAVEL--EERENGLFFSKGWQGFVKDHHLEVGNFLVFRYDGESKF-- 97 
                        67777..7778888.***********666..45589**************..**********************************9999.. PP

                        EEEEE-S CS
                 B3  93 vvkvfrk 99 
                        +v+++++
  Pd.00g1186350.m01  98 KVTIYDR 104
                        8988887 PP
2B351.71.6e-162012791494
                        T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
                 B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                         +l++pkk a + g+ +++   +tl+d++gr W vkl +  + + +r+ +t+GW e ++an++ +gD++vF+++++s     +
  Pd.00g1186350.m01 201 YCLMIPKKLAIAEGLTSAR--NVTLQDPNGRLWLVKLVIrpKTSCKRVEFTTGWGECCQANQISVGDTMVFEFVKQSAI--QL 279
                        349*******999999666..6***************8777777788*************************9876555..44 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MARKLMKRSV KKESFFKILL GDFSKHLRIP PAFIKKFNGG SLRKCSLRGP SGKWRAVELE  60
ERENGLFFSK GWQGFVKDHH LEVGNFLVFR YDGESKFKVT IYDRSACEKD VEVAERGIGS  120
SDSIESKGNQ VRVKEEIIDL ETENYNEDYE NKTSIANRRN CNAMSGKKPT TDYVEETSSE  180
CISFKSDHRC FMETMKRHYR YCLMIPKKLA IAEGLTSARN VTLQDPNGRL WLVKLVIRPK  240
TSCKRVEFTT GWGECCQANQ ISVGDTMVFE FVKQSAIQLH IFGAVNGKRC PVVLDAPTGE  300
N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.11e-21B3 family protein