PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1186360.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 237aa    MW: 26379.5 Da    PI: 9.8849
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1186360.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B343.17.5e-141332181399
                        TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                 B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                        + r+ +pk+ a + g++  ++  ++l+d++grsW+vkl+    + ++gr ++t+G     + n++  gD++vF+l++rse    v++fr+
  Pd.00g1186360.m01 133 QYRMNIPKELAVAEGLI--GKERVMLKDPNGRSWNVKLRLdakEHHGGRLLMTQGLVACWQVNNISLGDTIVFELVKRSEM--EVHIFRT 218
                        56899******999888..4557***************99776777777*************************9986555..9999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MARKPTKPSP KPPSFFKVLL GDDFPRQLCL PPAFMVHYNG PSHCKCALRG PTGKWWTVGL  60
EEREDGFYFH EGGSKFDVTI YHPMGCDMRR SIGNSVRPGK RPATAAAVEE TSTGSIVFRS  120
EHPCFMGILG KNQYRMNIPK ELAVAEGLIG KERVMLKDPN GRSWNVKLRL DAKEHHGGRL  180
LMTQGLVACW QVNNISLGDT IVFELVKRSE MEVHIFRTGA GGNMRSVVLD ASSSVKH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.18e-10B3 family protein