PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1186630.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

GeBP

Protein Properties

Length: 239aa MW: 27194.2 Da PI: 9.9119

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1186630.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	105.4	4.5e-33	73	165	3	98
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskk 94 qr+ws++Dei++L G+id+ +k+g++p +d+ af++f+kks++++v+k+ql +KirrLKkK++++v+k g++ + k+h+ +f+ls+k Pd.00g1186630.m01 73 LQRIWSDDDEITILEGMIDYYTKQGVHPNADMFAFHDFMKKSLKADVNKTQLQDKIRRLKKKYETNVAK---GSKYNPVKPHELRVFNLSNK 161 69*****************************************************************...999999********** PP DUF573 95 iWgs 98 +Wgs Pd.00g1186630.m01 162 VWGS 165 95 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MEETPKNKKP RWKASATTTP AARAGSKRPS ESDPKDSKRP KKKKIPDSDQ EPDHAGEEMK 60 KAGGDDSKKL FLLQRIWSDD DEITILEGMI DYYTKQGVHP NADMFAFHDF MKKSLKADVN 120 KTQLQDKIRR LKKKYETNVA KGSKYNPVKP HELRVFNLSN KVWGSGEGSF ALSGLSEQYK 180 CNETGMGLRE LRLLEDCLEL IGEPKRVGLK EEWKKLHVAE LELLAKRGEL AKLILEALK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00390.1	1e-26	GeBP family protein