PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1186840.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GeBP
Protein Properties Length: 129aa    MW: 14623.8 Da    PI: 9.2715
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1186840.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57357.63.6e-18611292495
             DUF573  24 aktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 
                        +k+g +p+ d+ +f++f+k+ ++++v+k+ql +Kir+LKkK++++++k   gk+ +  k+h+ k+f+lsk +
  Pd.00g1186840.m01  61 SKKGLNPYGDMVDFHDFFKNLLKADVNKTQLQDKIRKLKKKYETNMAK---GKKYNTIKPHELKVFDLSKNV 129
                        689*********************************************...99999*************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    
MAAPTPESEP EEPETPKVVP TPEAKSDEPK PPKVAPIPES EELKPSKVAP TPESKFESEY  60
SKKGLNPYGD MVDFHDFFKN LLKADVNKTQ LQDKIRKLKK KYETNMAKGK KYNTIKPHEL  120
KVFDLSKNV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G11510.12e-08GeBP family protein