PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1190230.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 213aa    MW: 25079.8 Da    PI: 4.8394
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1190230.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM32.23.2e-10610432128
                NAM  32 evikevdi..ykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratk.sgyWkatgkdkevlskkgelvglkktLvfykgrapkge 117
                        +vi+++++  +k eP+++ + + +   +++++yf s+ ++   +g r +r+t   g+W++t + ++v+++++  +g k+ + + +g++++  
  Pd.00g1190230.m01   6 KVIHKCNLfgNKREPSEIWRDYGGdqlDDQDLYFVSELQR---NGLRIQRKTGrCGTWSETETYQDVKDEGDGIIGRKRKFRYENGNTSE-D 93 
                        5677777622467999996433222226667888888776...688999955438****************************9998888.8 PP

                NAM 118 ktdWvmheyrl 128
                        ++ W+++ey+l
  Pd.00g1190230.m01  94 HAGWLLDEYSL 104
                        9********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MPPYNKVIHK CNLFGNKREP SEIWRDYGGD QLDDQDLYFV SELQRNGLRI QRKTGRCGTW  60
SETETYQDVK DEGDGIIGRK RKFRYENGNT SEDHAGWLLD EYSLFEKGCK NRTSRNCYDF  120
DVVICRLRRK CNMDGQVREK EEMLISRSIK QEDEKRSIYK GDAEPLSTYA LDDVYNVVSQ  180
PLDQNSCWSK SFMDQTYNCY VYSSIEEEII ADN