PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1190670.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 255aa    MW: 28038.5 Da    PI: 5.6787
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1190670.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH171.1e-053584154
                       CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                       +r  + erE++ R++ N+ f eL + l  +    ++ + Ka+iL +A++ +k+L
  Pd.00g1190670.m01 35 KRIHKAEREKQKREHFNELFLELADALELN----QQNNGKASILCEATRLLKDL 84
                       688899*********************998....68899999******999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MGSQDPVPAA DKANVTEASV RGACSGKKIQ GKIPKRIHKA EREKQKREHF NELFLELADA  60
LELNQQNNGK ASILCEATRL LKDLIGQIEY LQKENASLLS ESNYMTIEKN ELREDNSALE  120
TQIEKLHSEI EDKVVQSKPG LNAAPPCAEL RPEVASHFTG TSISLPTQDP SLQQAPAVFV  180
MPLCPDLQSY PLPDAAQLTS NTTSHVSKPH ARYPTSVDSW PSQLLGEKPT AGKESRQLGN  240
SSNICRSRET DPDNM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.25e-56bHLH family protein