PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1192300.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 213aa    MW: 23529.1 Da    PI: 5.6328
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1192300.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2621.3e-191361355
                AP2  3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                       ++GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a++ a+++l+g
  Pd.00g1192300.m01 13 FRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDTAARSLRG 61
                       8*******.**********883....5*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MVFRPTAGQE IRFRGVRKRP WGRFAAEIRD PWKKTRVWLG TFDSAEDAAR AYDTAARSLR  60
GPKAKTNFPP STSAADYDIN NNHRLPPHHP SLYDDDAVCD VVQASRPTSS SLSSTVESFS  120
GPRPQPRPTS DAQLQRRPVN PVPPDDCHSD CDSSSSVVDD GDDCVMTSSF RRVSPLPFDL  180
NLPPPPMMDG LDLFKSGEVY GDDHDLQATA LCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.12e-25ERF family protein