PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1192300.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 235aa    MW: 25915.9 Da    PI: 5.3401
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1192300.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.81.6e-193583355
                AP2  3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                       ++GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a++ a+++l+g
  Pd.00g1192300.m02 35 FRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDTAARSLRG 83
                       8*******.**********883....5*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MRIVEEARVV LQGFTEARCQ YGVLLGPTAG QEIRFRGVRK RPWGRFAAEI RDPWKKTRVW  60
LGTFDSAEDA ARAYDTAARS LRGPKAKTNF PPSTSAADYD INNNHRLPPH HPSLYDDDAV  120
CDVVQASRPT SSSLSSTVES FSGPRPQPRP TSDAQLQRRP VNPVPPDDCH SDCDSSSSVV  180
DDGDDCVMTS SFRRVSPLPF DLNLPPPPMM DGLDLFKSGE VYGDDHDLQA TALCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.12e-25ERF family protein