PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g119270.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Trihelix
Protein Properties Length: 378aa    MW: 42471.7 Da    PI: 8.7268
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g119270.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix92.73.7e-29193277186
          trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                       rW+++ev+aLi +r+ +e+++++   k++ Weevs+ m + g++rs+k+Ck+kwen+nk+++k+k+++kkr + + +tc+yf+ql+
  Pd.00g119270.m01 193 RWPQSEVKALILVRSGIESKFQEPGVKGHVWEEVSALMGSMGYQRSAKRCKQKWENINKYFRKTKDSAKKR-PHNFKTCSYFNQLD 277
                       8*********************************************************************8.88889********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    
MGEANQTGSG SALTGENSPK NVDLPVPFCD PHDLNVAPTA QVRVDDGSEA SIGEESSPRK  60
IQKRKRKRTM KKQLSSVISF FESLVTQVMD HQENLHKKYL EVIERTDKER REREAAWRNQ  120
EAENHKREAI AKVHEQALAS SREALIVSYI EKITGQRVNL PSRQAPLLLQ PDNLNEPPVE  180
ELTPFKIDHT NSRWPQSEVK ALILVRSGIE SKFQEPGVKG HVWEEVSALM GSMGYQRSAK  240
RCKQKWENIN KYFRKTKDSA KKRPHNFKTC SYFNQLDQLY SGTPITAPSS SSSYYSSNPS  300
ASMDDNIPKQ GFSDLLEAFV AGREAGVAHN LSSGNFEISE MGSNRLDFDG IIGGKLVIGA  360
RAIEIPSNLN DHLFYQNR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15973RKIQKRKRKRTMKKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76890.21e-47Trihelix family protein