PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g119300.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 248aa MW: 28210.6 Da PI: 5.83

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g119300.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.4	1.9e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd+ll+d+++ +G g W+++++ g++R++k+c++rw++yl Pd.00g119300.m01 14 RGPWTAEEDKLLADYIRAHGEGKWSSVSKQAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP
2	Myb_DNA-binding	52.6	1.1e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T++E++l+++++k+lG++ W++Ia +++ gRt++++k++w++ Pd.00g119300.m01 67 RGNITQDEEDLIIRLHKLLGNR-WSLIAGRIP-GRTDNEIKNYWNTN 111 7999****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MGRRPCCSKE GVKRGPWTAE EDKLLADYIR AHGEGKWSSV SKQAGLKRCG KSCRLRWLNY 60 LRPNIKRGNI TQDEEDLIIR LHKLLGNRWS LIAGRIPGRT DNEIKNYWNT NLCKEPPPPP 120 NNFVSCRPSK EASSDPQQQS KAEVNLSNVP KYNNQNAESE CSEGSLSSLP TTREEEDYSS 180 RDLWMNFYTR EMSLSQFLDI DFSNLSNLFA EVIVGGYSST KAMHDDDVEA YFGAQLAAFT 240 DLADEWIM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	4e-61	MYB family protein