PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1193650.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

GeBP

Protein Properties

Length: 348aa MW: 37999.8 Da PI: 9.6627

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1193650.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	99.8	2.4e-31	147	237	4	97
DUF573 4 qrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 rlwse+Dei++L+G+i+++ k+ + + af+ef+kk+++++vsk ql++KirrLK K++kk ++ g++p+fsk+h+ k+f+lskk+ Pd.00g1193650.m01 147 GRLWSEDDEIAILKGMIEYQVKNVPVTNSTMGAFHEFIKKKLQVDVSKLQLSDKIRRLKMKYQKKGEN---GEDPVFSKPHEVKSFDLSKKV 235 59***************8888878888******************************99999...******************* PP DUF573 96 Wg 97 Wg Pd.00g1193650.m01 236 WG 237 *8 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MAPKKLLDDP PVVEDSDEET ALLTSSSAVS NSNPQWPSAS EDDSGSGSET ESENNSQSPS 60 ASDFTVKPIV SKPMNDTVKP NKKNAPAKPA PASNSGSKRP ETEPNKKNAP SSSNSGSKRR 120 AETEPNPKDS KKKKVVNSGD DDDGKKGRLW SEDDEIAILK GMIEYQVKNV PVTNSTMGAF 180 HEFIKKKLQV DVSKLQLSDK IRRLKMKYQK KGENGEDPVF SKPHEVKSFD LSKKVWGVEA 240 NGVDDNAKDS KRKPRKSNKV DKATVLALPV SDVAPVSDVA EKKEELNVAN GGIKADPKMP 300 LIGKSKAKEL EGKWRALQLI EMELSVKKLA LMQEQAKFVL DSMKSSED

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MAPKKLLDDP PVVEDSDEET ALLTSSSAVS NSNPQWPSAS EDDSGSGSET ESENNSQSPS  60
ASDFTVKPIV SKPMNDTVKP NKKNAPAKPA PASNSGSKRP ETEPNKKNAP SSSNSGSKRR  120
AETEPNPKDS KKKKVVNSGD DDDGKKGRLW SEDDEIAILK GMIEYQVKNV PVTNSTMGAF  180
HEFIKKKLQV DVSKLQLSDK IRRLKMKYQK KGENGEDPVF SKPHEVKSFD LSKKVWGVEA  240
NGVDDNAKDS KRKPRKSNKV DKATVLALPV SDVAPVSDVA EKKEELNVAN GGIKADPKMP  300
LIGKSKAKEL EGKWRALQLI EMELSVKKLA LMQEQAKFVL DSMKSSED

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	118	134	KRRAETEPNPKDSKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00390.1	1e-24	GeBP family protein