PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g119410.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Nin-like

Protein Properties

Length: 395aa MW: 44865.3 Da PI: 4.747

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g119410.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	78.1	9.6e-25	307	357	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +++++l+dl+ y +lpi++AA+ L+vc+Tv+KriCR++G++RWP+Rki+s+ Pd.00g119410.m01 307 TANMTLDDLRDYVHLPIEKAARRLNVCPTVVKRICRRNGLRRWPSRKITSI 357 789*********************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MVEERGALGA AKWSEREKRR KMKRSDPRAV VPYHDPYDSG PYTEIMNLLN DSEHPRIDEN 60 NIPPLEGSLA SPNPTPMFDE EIQDVDEPLM DQAMWDFIYG SDNGGEGINS QAGPSQIFTE 120 SSGTNPPRGD GNEQNHGFGN VRPLSVWPLP SDPINCTFCQ VFREIVHFNS DNVMKLEIHG 180 RLGVICHAIL QSRPNANLNS SGNHQYQMLD FCKTPGEEVK QFLMQYCLER KLEGYIMQQD 240 PLTFFYEALC VGVDWDAILN PTDDFDFPPS PPDSGDMEKP AEVQPEAAEH EIETNPRISL 300 AEQRERTANM TLDDLRDYVH LPIEKAARRL NVCPTVVKRI CRRNGLRRWP SRKITSINRK 360 ISRLRPSLGS DDAETRVHAE AEISRLEREI AELVP

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MVEERGALGA AKWSEREKRR KMKRSDPRAV VPYHDPYDSG PYTEIMNLLN DSEHPRIDEN  60
NIPPLEGSLA SPNPTPMFDE EIQDVDEPLM DQAMWDFIYG SDNGGEGINS QAGPSQIFTE  120
SSGTNPPRGD GNEQNHGFGN VRPLSVWPLP SDPINCTFCQ VFREIVHFNS DNVMKLEIHG  180
RLGVICHAIL QSRPNANLNS SGNHQYQMLD FCKTPGEEVK QFLMQYCLER KLEGYIMQQD  240
PLTFFYEALC VGVDWDAILN PTDDFDFPPS PPDSGDMEKP AEVQPEAAEH EIETNPRISL  300
AEQRERTANM TLDDLRDYVH LPIEKAARRL NVCPTVVKRI CRRNGLRRWP SRKITSINRK  360
ISRLRPSLGS DDAETRVHAE AEISRLEREI AELVP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66990.1	4e-14	Nin-like family protein