PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1195360.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 282aa MW: 32372.2 Da PI: 7.8333

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1195360.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.4	1.7e-18	17	64	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ll ++v+++G g+W+ +a++ g++R++k+c++rw +yl Pd.00g1195360.m01 17 KGPWTPEEDKLLNEYVNLHGEGRWSCVAKCAGLNRSGKSCRLRWVNYL 64 79********************************************97 PP
2	Myb_DNA-binding	50	6.9e-16	70	114	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T++E+ +++++++++G++ W+tIar+++ gRt++++k++w+++ Pd.00g1195360.m01 70 RGHITPQEEGIIIELHALWGNK-WSTIARYLP-GRTDNEIKNFWRTH 114 6778****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence
MVTMMGWGFA EQQGWRKGPW TPEEDKLLNE YVNLHGEGRW SCVAKCAGLN RSGKSCRLRW 60 VNYLRPGLKR GHITPQEEGI IIELHALWGN KWSTIARYLP GRTDNEIKNF WRTHFKKKEK 120 CTQKQEKRKA QILLAKQQQQ QEQQQQQQLQ EDQNLKIRAT PQSEASQGEN INMTTDHEAQ 180 ARQENNMDLI SSSYPNFEGD QYCLPALMNQ GSVGSWADIL GEEGLFMGRL WNLDDEHVNG 240 RMDRNTSLSQ CNKSAMQNQA AVTAFSSGGD YSNTFYNGGY IF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30210.1	5e-71	MYB family protein