PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1200570.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 113aa    MW: 13098.1 Da    PI: 8.3258
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1200570.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS125.75.4e-391107267374
               GRAS 267 lfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgsl 358
                        +f+s++++lpr+++eri+vE+++l+re+vn++aceg er+erhe l+kW+ r+ +aGF+p+pls+ +++++k+ll ++++  yr++e++g+l
  Pd.00g1200570.m01   1 MFESIDVTLPRDHKERINVEQHCLAREVVNIIACEGVERVERHELLGKWKLRFAMAGFTPYPLSSLVNSTIKTLLDNYSD-KYRLQERDGAL 91 
                        7******************************************************************************5.5********** PP

               GRAS 359 vlgWkdrpLvsvSaWr 374
                        +lgWk+r Lv+ +aW+
  Pd.00g1200570.m01  92 YLGWKNRDLVASCAWK 107
                        ***************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 113 aa     Download sequence    
MFESIDVTLP RDHKERINVE QHCLAREVVN IIACEGVERV ERHELLGKWK LRFAMAGFTP  60
YPLSSLVNST IKTLLDNYSD KYRLQERDGA LYLGWKNRDL VASCAWKCKP STN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.13e-67GRAS family protein