PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1200570.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 167aa    MW: 19295.1 Da    PI: 8.3179
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1200570.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS202.72.2e-622161214374
               GRAS 214 ldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaer 305
                        +desvs++++rd++L+lvkslsPkvv++veqe+++n++ F+ rf+e+l+yy+a+f+s++++lpr+++eri+vE+++l+re+vn++aceg er
  Pd.00g1200570.m02   2 PDESVSTQNHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFVETLNYYTAMFESIDVTLPRDHKERINVEQHCLAREVVNIIACEGVER 93 
                        799***************************************************************************************** PP

               GRAS 306 rerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                        +erhe l+kW+ r+ +aGF+p+pls+ +++++k+ll ++++  yr++e++g+l+lgWk+r Lv+ +aW+
  Pd.00g1200570.m02  94 VERHELLGKWKLRFAMAGFTPYPLSSLVNSTIKTLLDNYSD-KYRLQERDGALYLGWKNRDLVASCAWK 161
                        ****************************************5.5*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MPDESVSTQN HRDRLLRLVK SLSPKVVTLV EQESNTNTAA FFPRFVETLN YYTAMFESID  60
VTLPRDHKER INVEQHCLAR EVVNIIACEG VERVERHELL GKWKLRFAMA GFTPYPLSSL  120
VNSTIKTLLD NYSDKYRLQE RDGALYLGWK NRDLVASCAW KCKPSTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-106GRAS family protein