PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1201100.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 230aa    MW: 25253.1 Da    PI: 7.0855
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1201100.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.22.3e-193078355
                AP2  3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                       ++GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a++ a+++l+g
  Pd.00g1201100.m01 30 FRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDTAARYLRG 78
                       8*******.**********883....5*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MRRGGRATAA AGAQLCNPKP KPTAGQEIRF RGVRKRPWGR FAAEIRDPWK KTRVWLGTFD  60
SAEDAARAYD TAARYLRGPK AKTNFPPPTS AADYDINNNH RLPPHHPSLY DDDTVCDVVQ  120
ASRPTSSSLS STVESFSGPR PQPRPTSDAQ LQRRPVHPVP PDDCHSDCDS SSSVVDDGDD  180
CVLTSSFRRV SPLPFDLNLP PPPMMDGLDL FKSGEVYGDD HDLQATALCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.15e-25ERF family protein