PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1204630.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 82aa    MW: 9345.78 Da    PI: 10.8449
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1204630.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.74.8e-122361248
                       HHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
    Myb_DNA-binding 12 lvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                       ++++ ++lG++ W++Ia++++  Rt++++k++w+++l
  Pd.00g1204630.m01  2 IIHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 36
                       5788999****.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 82 aa     Download sequence    
MIIHLQALLG NRWAAIASYL PQRTDNDIKN YWNTHLKKKL RKLQTGLDGH DHRNSQDGFS  60
GLTKLPLMHP TPKTLRNCSK AG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47600.12e-24MYB family protein