PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1206070.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 538aa MW: 58305.8 Da PI: 5.0385

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1206070.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.2	1.6e-17	17	64	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +lv++vk++G g+W+++ ++ g+ R++k+c++rw ++l Pd.00g1206070.m01 17 KGPWTSAEDAILVEYVKKHGEGNWNAVQKHSGLFRCGKSCRLRWANHL 64 79******************************************9986 PP
2	Myb_DNA-binding	53.8	4.6e-17	70	113	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T+eE+ l+v++++++G++ W++ a++++ gRt++++k++w++ Pd.00g1206070.m01 70 KGAFTPEEEHLIVELHAKMGNK-WARMAAHLP-GRTDNEIKNYWNT 113 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 538 aa Download sequence
MDESNGGTGN GGIVLKKGPW TSAEDAILVE YVKKHGEGNW NAVQKHSGLF RCGKSCRLRW 60 ANHLRPNLKK GAFTPEEEHL IVELHAKMGN KWARMAAHLP GRTDNEIKNY WNTRIKRRQR 120 AGLPLYPPEV CLQALQESQQ GQSSGGINGA DRAHHDSLQP NSYEIPDVVF ESLKGNNCVL 180 PYVPEIPDLS ASGVLMKGLS SSPYCGFMPP TMHRQKRLRE STSLFSTSDG SFKNGFPQFD 240 HFQDDTCDKV GQSFGLSFPH DPDPTTKSPL SFGVIQGSHS LSNGNSSASK PTSGAVKLEL 300 PSLQYPETDL GSWSTSPPPP LLESIDAFIQ SPPPVGAFES DCASPRNSGL LDALLYEAKT 360 LSSAKNLSSD KSSNSSSATP GDIADSSTLN ICETEWEDYR DPISPLGHSA TSLFSECTPI 420 SASGSSLDEP PPAETFTGCN VKPEPVDQAW TPDKEKETTP QLDYTRPDAL LASDWLEHST 480 GFKDQGMTDS IASILGDDLA TDYRHMASGT SISNQVWGLG SCLWNNMPAV CQMSSDLP

Sequence ? help Back to Top

Protein Sequence Length: 538 aa Download sequence

MDESNGGTGN GGIVLKKGPW TSAEDAILVE YVKKHGEGNW NAVQKHSGLF RCGKSCRLRW  60
ANHLRPNLKK GAFTPEEEHL IVELHAKMGN KWARMAAHLP GRTDNEIKNY WNTRIKRRQR  120
AGLPLYPPEV CLQALQESQQ GQSSGGINGA DRAHHDSLQP NSYEIPDVVF ESLKGNNCVL  180
PYVPEIPDLS ASGVLMKGLS SSPYCGFMPP TMHRQKRLRE STSLFSTSDG SFKNGFPQFD  240
HFQDDTCDKV GQSFGLSFPH DPDPTTKSPL SFGVIQGSHS LSNGNSSASK PTSGAVKLEL  300
PSLQYPETDL GSWSTSPPPP LLESIDAFIQ SPPPVGAFES DCASPRNSGL LDALLYEAKT  360
LSSAKNLSSD KSSNSSSATP GDIADSSTLN ICETEWEDYR DPISPLGHSA TSLFSECTPI  420
SASGSSLDEP PPAETFTGCN VKPEPVDQAW TPDKEKETTP QLDYTRPDAL LASDWLEHST  480
GFKDQGMTDS IASILGDDLA TDYRHMASGT SISNQVWGLG SCLWNNMPAV CQMSSDLP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.3	1e-136	MYB family protein