PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1207790.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 156aa    MW: 16484.2 Da    PI: 3.9022
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1207790.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.20.000681271443855
                        STCHHHHHHHHHHHHHHH CS
                HLH  38 lsKaeiLekAveYIksLq 55 
                         + a++L +AveY+k Lq
  Pd.00g1207790.m01 127 TNTADMLDEAVEYVKFLQ 144
                        689**************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MEYLAACCGL GRFCSAPATW LEALLEEEEE DPLKPAQCLT ELLAENTGAT SVGFGSTTVD  60
PVSYEAAAAA GFLSRQNSSP AEFLGSSNDG SEGYFSGFGI PAHLDFVSLS PNSSSPSANK  120
RVREVQTNTA DMLDEAVEYV KFLQKQIQSI SADANA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G35460.12e-19bHLH family protein