PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1210560.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 142aa    MW: 16199.4 Da    PI: 8.1852
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1210560.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM67.63.4e-2110112198
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 
                        lp+Gf+F+P+d++l+ +yL +kv+g+++  ++vi+e+d+y k+ePwd+ +    +  a+ +++yfF+k ++ + +++r+ r++ sg+Wk   
  Pd.00g1210560.m01  10 LPVGFKFRPRDDQLLGYYLLNKVRGTSFMYDNVIPEMDLYgKIEPWDIWHeyggHNLAKGEDLYFFTKLKSLSDKDSRAARTIGSGTWKGEN 101
                        79**************************99999*****99568*****742444222366799**************************999 PP

                NAM  88 kdkevlskkge 98 
                        + ++v + +++
  Pd.00g1210560.m01 102 SGTTVSDPENK 112
                        98888886333 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MAPCESAVNL PVGFKFRPRD DQLLGYYLLN KVRGTSFMYD NVIPEMDLYG KIEPWDIWHE  60
YGGHNLAKGE DLYFFTKLKS LSDKDSRAAR TIGSGTWKGE NSGTTVSDPE NKENDLVYNG  120
RVCMFMKISQ TSKSRRPVQM IS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.11e-15NAC family protein