PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1210590.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 381aa MW: 42650 Da PI: 4.4264

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1210590.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	77.6	2.7e-24	10	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 lp+Gf+F+P+d++l+ +yL +kv+g+++ ++vi+e+d+y k+ePwd+ + + a+ +++yfF+k ++ + +++r+ r++ g+Wk Pd.00g1210590.m01 10 LPVGFKFRPRDDQLLGYYLLNKVRGTSFMYDNVIPEMDLYgKIEPWDIWHeyggHNLAKGEDLYFFTKLKSLSDKDSRAARTIGFGTWKGEN 101 79************************99999*99568*742444222366799**********************999 PP NAM 88 kdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++v + k+++ g+ k + + + ++ + W+mhey+l Pd.00g1210590.m01 102 SGTTVSDPenKENDLGIWKRFHYE--NPKSVQDGCWIMHEYSL 142 999999886566779999999886..566667999****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MAPCEFAVNL PVGFKFRPRD DQLLGYYLLN KVRGTSFMYD NVIPEMDLYG KIEPWDIWHE 60 YGGHNLAKGE DLYFFTKLKS LSDKDSRAAR TIGFGTWKGE NSGTTVSDPE NKENDLGIWK 120 RFHYENPKSV QDGCWIMHEY SLHPSLVKPK PNSTNQFVLC RIRKNDRGKR KLRTAEEDNE 180 TDTPVQSQNK RQRPQQVTSF EELIGDCTPM SEATGVGGSV SYLPTGLTQS QPDSSFAYPT 240 TVVSSQARAN YIDDVSQFHG GGDGDALMSD FSHSDTAQPF TEQALGSYAV CNQERASDVY 300 ETQQGLALTD NNIGYWPSPF GSEEDQVNAL DFSMDYDLLN HLINCDDDND GPRQSSTAQF 360 MGMGMENTTT ASSEANMVII D

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MAPCEFAVNL PVGFKFRPRD DQLLGYYLLN KVRGTSFMYD NVIPEMDLYG KIEPWDIWHE  60
YGGHNLAKGE DLYFFTKLKS LSDKDSRAAR TIGFGTWKGE NSGTTVSDPE NKENDLGIWK  120
RFHYENPKSV QDGCWIMHEY SLHPSLVKPK PNSTNQFVLC RIRKNDRGKR KLRTAEEDNE  180
TDTPVQSQNK RQRPQQVTSF EELIGDCTPM SEATGVGGSV SYLPTGLTQS QPDSSFAYPT  240
TVVSSQARAN YIDDVSQFHG GGDGDALMSD FSHSDTAQPF TEQALGSYAV CNQERASDVY  300
ETQQGLALTD NNIGYWPSPF GSEEDQVNAL DFSMDYDLLN HLINCDDDND GPRQSSTAQF  360
MGMGMENTTT ASSEANMVII D

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	167	173	RGKRKLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17260.1	1e-17	NAC family protein