PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1213510.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 391aa    MW: 44399.7 Da    PI: 9.1534
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1213510.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.74.5e-181099398
                       EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                 B3  3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96
                        +l+ s++l+ ++l++p +f+++ g +   s+  tl  ++g++W+v +  +k ++++++ +GW+eF +   +++g f++F+++g+s+f  +v++
  Pd.00g1213510.m01 10 HKLILSSTLQAKQLMIPENFVKKLGDD--LSTVATLSVPDGNVWRVGI--KKADNKFWFHDGWQEFIERYSIRVGYFLTFRYEGHSSF--TVHI 97
                       5677789999999***********988..88999999***********..**********************************9999..8888 PP

                       E- CS
                 B3 97 fr 98
                       f+
  Pd.00g1213510.m01 98 FN 99
                       85 PP
2B359.27.5e-19277366497
                        E-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
                 B3   4 vltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                        vl ps+  + ++++lp  fae++ +g++     ++l++++gr+W v++ yr+++    l++GW eF  +n+L egD++vF+l + +e  l+v
  Pd.00g1213510.m01 277 VLRPSYLYRGCIMYLPSCFAEKNlNGVSG---FIKLQSSDGRQWPVRCLYRGGR--AKLSQGWYEFTLENNLGEGDVCVFELLKMKEVVLKV 363
                        78899******************877743...5***************665555..66***********************98877776777 PP

                        EEE CS
                 B3  95 kvf 97 
                        +vf
  Pd.00g1213510.m01 364 TVF 366
                        765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    
MKNMIRPCFH KLILSSTLQA KQLMIPENFV KKLGDDLSTV ATLSVPDGNV WRVGIKKADN  60
KFWFHDGWQE FIERYSIRVG YFLTFRYEGH SSFTVHIFNL TTAEINYQPN ALSSTGGSVY  120
RHQVFEEMED DDSVEILGSS PKSIVTDSLR DKLFGDCATQ LIPGKDYNPP ALQNLFNGSK  180
PKNCTNWPDA GNPHPSKGSG LQAGEDIRSM KKTMRKKRKL DPTVQESSSQ HEKEVEIRFR  240
FYESASARKR TVTAEERERA INAAKTFEPV NPFCRVVLRP SYLYRGCIMY LPSCFAEKNL  300
NGVSGFIKLQ SSDGRQWPVR CLYRGGRAKL SQGWYEFTLE NNLGEGDVCV FELLKMKEVV  360
LKVTVFCVVE AAGFVNQPPQ QNASQAKMIR N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-137B3 family protein