PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1213940.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 226aa    MW: 25555.6 Da    PI: 5.632
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1213940.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3573.6e-1825114499
                        E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
                 B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                        +++  d+++   l++pk+f++++++    s  + l+ +sg +Wev++  + ++g+++l kGW eF k   L++g ++vFk+dg+s+f   v 
  Pd.00g1213940.m01  25 KMILDDTSRDTKLRIPKSFVKKYEKH--LSNPVHLKLPSGSEWEVEV--TTCDGEVWLDKGWPEFSKFYSLEQGGSLVFKYDGNSKF--QVC 110
                        566678888899***********844..7788***************..**********************************9999..888 PP

                        EE-S CS
                 B3  96 vfrk 99 
                        ++++
  Pd.00g1213940.m01 111 ILDA 114
                        8776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MSASLRQKID HEWPAFSATT PLFLKMILDD TSRDTKLRIP KSFVKKYEKH LSNPVHLKLP  60
SGSEWEVEVT TCDGEVWLDK GWPEFSKFYS LEQGGSLVFK YDGNSKFQVC ILDASGTEID  120
YPLALPVMEE TNEDDENKSV EILEDYDDEN DNSAEFFGDY QPCPKTRQKS GPLSCPLPRK  180
KTRLSTHSSP EISSSSSKRV VEAANKFISN HSFRVTGHIP YAGKAH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.17e-24B3 family protein