PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1214170.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 146aa    MW: 15988 Da    PI: 9.1521
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1214170.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.85.4e-182170255
                AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                        ykG+r +k +g+WvAeIr+p   +kr r++lg++ t+  Aa+a++ a  +l+g
  Pd.00g1214170.m01 21 PYKGIRMRK-WGKWVAEIREP---NKRSRIWLGSYSTPIAAARAYDTAVFYLRG 70
                       69*****99.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
MDGGGGVAET NRKRGVENDK PYKGIRMRKW GKWVAEIREP NKRSRIWLGS YSTPIAAARA  60
YDTAVFYLRG PSARLNFPEA LPRATEVGAR VDAVETAMRH HRGGTAAPNG GAAEIKPCVG  120
GFVDRVDLNK MPDPENSDGD CEWETS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67190.12e-52ERF family protein