PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1214190.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family AP2
Protein Properties Length: 442aa    MW: 49484.6 Da    PI: 7.8704
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1214190.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.65.4e-1795144155
                AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                        s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  Pd.00g1214190.m01  95 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 144
                        78*******************......55************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 442 aa     Download sequence    
MTHEESMDSD PPVTVTRQFF PVELDSTSEI MGPTRGSVPP PAPPSSSLSS FPRAHWVGVN  60
FGQSDSGSPG KPPAAVEAAH QPMKKSRRGP RSRSSQYRGV TFYRRTGRWE SHIWDCGKQV  120
YLGGFDTAHA AARAYDRAAI KFRGVEADIN FSIEDYEEDL KQMTNLTKEE FVHVLRRQST  180
GFPRGSSKYR GVTLHKYVYL GLFDTEIDAA RAYDKAAIKC NGKEAVTNFD PSIYENELNP  240
SSEHNLDLSL GNSNSKKNNQ AFGSSDHGQN AAVEVQHSAS MQLEADWRNQ GFQQKLNLQR  300
DRSREESDAH RRDGYLETEA MQLLLRTNLH SPAPTEMHKY GQFSRRPNVG DTQMPHTFPP  360
HFNSPNNYHH VQFPSSSEGG RIGSDLSLSM SDHPHQQQWQ SGMPTSDIFA TAAASSGFPP  420
QIRPSAQNCW LQKSGFHSLT RR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36920.11e-92AP2 family protein