PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1216680.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 228aa    MW: 25478.6 Da    PI: 6.8439
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1216680.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA28.42.2e-09178198121
               GATA   1 CsnCgttkTplWRrgpdgnkt 21 
                        Cs C+t +TplWR+gp g+k 
  Pd.00g1216680.m01 178 CSDCHTNSTPLWRSGPLGPKA 198
                        ******************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MMTPVYLNPA SSPFSMVEQA EDQRLKLFIS PPYDEAASCT SFPFPTFFDS LQDQTPGTTF  60
TSLAHHQSQL YHHKDKNIWD CGTSYDQASS SSSLVQAHVV DAISNKDRRL SRCVKRMSSK  120
MRLMQKMTSN NPDLPPGTTD HIPAEISEHK FQIHAQPREI RETSFSSNSN NTAAVRVCSD  180
CHTNSTPLWR SGPLGPKALD FQRVFPQDVA EAAMLLMELS CGLINNHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56860.16e-10GATA family protein