PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1219270.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 361aa    MW: 40548 Da    PI: 5.4782
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1219270.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS335.41e-102236025374
               GRAS  25 arlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIleavegeervHiiD 116
                        + l+el sp+gd+ q+l++yf++AL +r+++s++++y++l + ++++ + +++ +++  f+evsP+ +f+h+++N aI+ea++ge ++HiiD
  Pd.00g1219270.m01   2 WMLNELGSPYGDTDQKLTSYFLQALFSRMTDSGDRCYRTLISASEKTCSFESTRKMVLKFQEVSPWTTFGHVACNGAIMEAFDGEPKLHIID 93 
                        789************************************96655554444444444455********************************* PP

               GRAS 117 fdisqGlQWpaLlqaLasRpegppslRiTgvgspesg.......skeeleetgerLakfAeelgvpfefnvlvak.rledleleeLrvkpgE 200
                        ++ ++++QWp+Ll+aLa+R++++p+lR+T+v++ +++        ++ ++e+g r++kfA+ +gvpf+fn+++++ +l++l+l+eL+++ +E
  Pd.00g1219270.m01  94 ISNTYCTQWPTLLEALATRTDETPHLRLTTVVATRASdgsggapAQKVMKEIGARMEKFARLMGVPFKFNAVHHSgDLSELNLSELDIRDDE 185
                        *******************************9987778999**999**************************8888**************** PP

               GRAS 201 alaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse....sFlerflealeyysalfdsleaklpreseerikvEre 288
                        alaVn+v  lh++     ++ ++rd ++++++sl+P+++++ve+ead++ +    +F+++f e+l+++ + f++l+++++r+s+er ++Er+
  Pd.00g1219270.m01 186 ALAVNCVGTLHSIQ----AVGNRRDYLVSAFRSLRPRIITLVEEEADLDVGvdgiEFVHGFQECLRWFRVYFEALDESFARTSNERLMLERA 273
                        *************8....8888899********************9986555666************************************* PP

               GRAS 289 llgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve...eesgslvlgWkdrpLvsvSaWr 374
                          gr++v++vac+ +e++er+et+++W++r++ aGF+pv++s+++ +++++llr++k +g+ +    e  + ++l Wkd+p+v++SaWr
  Pd.00g1219270.m01 274 -AGRAVVDLVACAPSESVERRETAARWSRRMHGAGFSPVTFSDEVCDDVRALLRRYK-EGWAMTqcsEAGAGIFLSWKDQPVVWASAWR 360
                        .********************************************************.5544443325566677**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MWMLNELGSP YGDTDQKLTS YFLQALFSRM TDSGDRCYRT LISASEKTCS FESTRKMVLK  60
FQEVSPWTTF GHVACNGAIM EAFDGEPKLH IIDISNTYCT QWPTLLEALA TRTDETPHLR  120
LTTVVATRAS DGSGGAPAQK VMKEIGARME KFARLMGVPF KFNAVHHSGD LSELNLSELD  180
IRDDEALAVN CVGTLHSIQA VGNRRDYLVS AFRSLRPRII TLVEEEADLD VGVDGIEFVH  240
GFQECLRWFR VYFEALDESF ARTSNERLML ERAAGRAVVD LVACAPSESV ERRETAARWS  300
RRMHGAGFSP VTFSDEVCDD VRALLRRYKE GWAMTQCSEA GAGIFLSWKD QPVVWASAWR  360
P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.10.0GRAS family protein