PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g121930.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Nin-like

Protein Properties

Length: 989aa MW: 109050 Da PI: 5.2447

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g121930.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.8	5.2e-29	589	640	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l++yF++++kdAAk+Lgvc+T++KriCR++GI+RWP+Rkik++ Pd.00g121930.m01 589 AEKSISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRHHGISRWPSRKIKKV 640 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 989 aa Download sequence
MVEPEEESRT QAIPPKSKNT VDDREAALME FDLDLDAFWP LDPIHFPSNP TSPPLFSSTD 60 QPCSPSWGFP DDDAHNDDKL AGQVDQALSD RPQFSSYVPD LGREIPRENE DRRMLTSPFL 120 GLEPVENPNA YCLIKEKITQ ALRQLKELTD QHVLAQVWAP VKNEGRYVLT TSGQPFVLDP 180 YTNGLHQYRM ASLMYMFSVD GESDGMLGLP GRVFQKKLPE WTPNVQYYSI KEYPRLGHAQ 240 HYNVQGTLAL PVFEPSGRSC VGVLELIMTS PKINYASEVN KVCKALEAVS LKSSEIHTSM 300 QIQICNEGRQ TALTEILEIL TVVCETHKLP LAQTWVPCMH RNVLAYGGGL KKSCTSFDGS 360 CMEQVCMSTT DAAFYIVDAP MWHFREACVE HHLQEGQGVA GRAFLSRNAC FCRDITQFCK 420 TDYPLVHYAR MFKLTSCFAL CLQSTHTGND DYILEFFLPP SITDSYEQQT LLGSLLAIIK 480 NHFQSLKVAS GIILEEEGLV EMVQASTNKG LDSRLECIRI PRSAETPPGP ALPNGEEMVQ 540 LDSSKPQLLV DFDPANDGSN AVNEGGGNNI SCPENKDIKK KSEKKRGKAE KSISLEVLQQ 600 YFAGSLKDAA KSLGVCPTTM KRICRHHGIS RWPSRKIKKV NHSLSKLQRV IESVQGAEGA 660 FGLTSFTASP RSGAVGSISR PYILNGSNQQ SSPSSKPSEL HGEKKDSPTP TTPGKEGQAW 720 IENQLLDGGI LSQEELLLEH GRFLLDDGKG SNASKTGSSS REASAGTPTS HGSCQGSPAN 780 GNELVNNPFV PSIHDRCIEV NGFPESAVRP PKEPNLSFAC SMPDVVLMTD PEEPCRGMLI 840 EDAGSSKDLK NLCPQVDAMV DEQVPEACCT NPPCSESALK PSNTMPHIIA RQEMKSVTIK 900 ATYKEDIIRF RISMSSGIVE LKDEVAKRLK LEMGTFDIKY VDDDLEWVLV ACDADLQECM 960 EICRSLGIKM IRLSVHDIMS NFGSSCGSM

Sequence ? help Back to Top

Protein Sequence Length: 989 aa Download sequence

MVEPEEESRT QAIPPKSKNT VDDREAALME FDLDLDAFWP LDPIHFPSNP TSPPLFSSTD  60
QPCSPSWGFP DDDAHNDDKL AGQVDQALSD RPQFSSYVPD LGREIPRENE DRRMLTSPFL  120
GLEPVENPNA YCLIKEKITQ ALRQLKELTD QHVLAQVWAP VKNEGRYVLT TSGQPFVLDP  180
YTNGLHQYRM ASLMYMFSVD GESDGMLGLP GRVFQKKLPE WTPNVQYYSI KEYPRLGHAQ  240
HYNVQGTLAL PVFEPSGRSC VGVLELIMTS PKINYASEVN KVCKALEAVS LKSSEIHTSM  300
QIQICNEGRQ TALTEILEIL TVVCETHKLP LAQTWVPCMH RNVLAYGGGL KKSCTSFDGS  360
CMEQVCMSTT DAAFYIVDAP MWHFREACVE HHLQEGQGVA GRAFLSRNAC FCRDITQFCK  420
TDYPLVHYAR MFKLTSCFAL CLQSTHTGND DYILEFFLPP SITDSYEQQT LLGSLLAIIK  480
NHFQSLKVAS GIILEEEGLV EMVQASTNKG LDSRLECIRI PRSAETPPGP ALPNGEEMVQ  540
LDSSKPQLLV DFDPANDGSN AVNEGGGNNI SCPENKDIKK KSEKKRGKAE KSISLEVLQQ  600
YFAGSLKDAA KSLGVCPTTM KRICRHHGIS RWPSRKIKKV NHSLSKLQRV IESVQGAEGA  660
FGLTSFTASP RSGAVGSISR PYILNGSNQQ SSPSSKPSEL HGEKKDSPTP TTPGKEGQAW  720
IENQLLDGGI LSQEELLLEH GRFLLDDGKG SNASKTGSSS REASAGTPTS HGSCQGSPAN  780
GNELVNNPFV PSIHDRCIEV NGFPESAVRP PKEPNLSFAC SMPDVVLMTD PEEPCRGMLI  840
EDAGSSKDLK NLCPQVDAMV DEQVPEACCT NPPCSESALK PSNTMPHIIA RQEMKSVTIK  900
ATYKEDIIRF RISMSSGIVE LKDEVAKRLK LEMGTFDIKY VDDDLEWVLV ACDADLQECM  960
EICRSLGIKM IRLSVHDIMS NFGSSCGSM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein