PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1221910.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 432aa    MW: 48887.3 Da    PI: 4.6586
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1221910.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.40.00049117133117
                        EEETTTTEEESSHHHHH CS
            zf-C2H2   1 ykCpdCgksFsrksnLk 17 
                        y+Cp+Cgk+++  + L+
  Pd.00g1221910.m01 117 YVCPNCGKRYNALDALQ 133
                        9**********999886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    
MSIEPFNKLV KLVGRAFYDD ITKGDNQPKT GRSDNRGIAV VVLDALSRRQ WVREEDLAKD  60
LKLHSKQLRR TLRFFEEEKL VTRDHRREIS DVVRYRVQRM KKKLKDELED KNTVQEYVCP  120
NCGKRYNALD ALQLVSMEDE YFHCESCNGE LVAESDKLAS QEVGDGDDNA RRRRREKLKD  180
LLQKMEAQLK PIYDQLNRVK DLPAPEFGGL QAWEARASAA KRAENGESNG MDPSKSSHGL  240
GYGGTPMPFL GDTKVEVDFS GVEGKGKDIK SEADGAGLKV LPPWMIKQGM NLTKEQRGEV  300
KQEAKMDGSG SLAAPEYSED KKFNTENNEK NLQDEYLKAY YAALIKRQEE EEAKKALESS  360
ETRVSDGPSG MSPSRQVGMK SKRDEDEGDD NVDWEEAPIT GNEENYKVND LNVEADATAE  420
AEDEDDIDWE EG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1171177RRRRREK
2172178RRRRREK