PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1223390.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 124aa    MW: 14192.8 Da    PI: 5.7392
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1223390.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.81.7e-0785113129
                        CHHHHHHHHHHHHHHHHHHHHHHHCTSCC CS
                HLH   1 rrrahnerErrRRdriNsafeeLrellPk 29 
                        ++ +h  +Er+RR+++ + ++ Lr+ lP 
  Pd.00g1223390.m01  85 KKIMHRDIERQRRQEMATLYASLRSQLPL 113
                        5789************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    
MDYIPSNTLQ FDQALQQADE LFQISCLPYT EHTTQENQAL PPTPSQDGRD LTCRPTSGQK  60
RKASISSSNI TFGEIDDEQN PKGNKKIMHR DIERQRRQEM ATLYASLRSQ LPLEYLKVQS  120
YIAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.17e-14bHLH family protein