PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1223730.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 237aa    MW: 26463.1 Da    PI: 5.9163
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1223730.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.88.7e-1655106155
                AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                        + y+GVr +  +++Wv+e+r p   + k+  ++lg++ tae+Aa+a++ a+++++g
  Pd.00g1223730.m01  55 PVYRGVRSRD-NNKWVCELRQP---NkKKSGIWLGTYPTAEMAARAHDVAALAFKG 106
                        68*****888.8******9998...5477***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MDIIFSQLSD SADQPKSSSS SDASVATLRT SDVILALSRP KKRAGRRVFK ETRHPVYRGV  60
RSRDNNKWVC ELRQPNKKKS GIWLGTYPTA EMAARAHDVA ALAFKGNLAC LNFADSGWRL  120
PVAASMDSMD IQRAAAEAAE GFRPVEFGGV SSDSSDEKER MVVVEEKKKK QVIVDMGKSC  180
SRLNLFYLDE EEMFDMPRLI DNMAEGLLLS PPQCLAGYLN WDDMETEADP KLWSFSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.15e-58ERF family protein