PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1223780.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 232aa    MW: 26053.3 Da    PI: 4.7637
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1223780.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.5e-1861112155
                AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                        + y+GVr++  +++Wv+e+r+p  n+k++r++lg++ tae+Aa+a++ a+++++g
  Pd.00g1223780.m01  61 PVYRGVRRRN-NNKWVCELREP--NNKKARIWLGTYPTAEMAARAHDVAALAFRG 112
                        68*****887.8******9998..4478************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MDMIYSQVSD LASLENQDTS SFSDASVTAR RASLSDEAVI LASSCPKRRA GRRVFKETRH  60
PVYRGVRRRN NNKWVCELRE PNNKKARIWL GTYPTAEMAA RAHDVAALAF RGKLACLNFA  120
DSAWRLPVPA STDAAEIRRA ATEAAEAFRQ AEDGDVDEKK SKGVVSEKKG CVEVEGSSNL  180
FYLDEEEIFE MPRLLDDMAE GLMLCPPQCL DGYMDWNDVE TDDDLKLWSF SI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.12e-60ERF family protein