PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1223840.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 171aa    MW: 18538.6 Da    PI: 4.3217
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1223840.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.69.9e-161059155
                AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                       ++y+G+r ++  g+Wv+eIr+p++   ++r++lg++ t+e+Aa a++ a+++l+g
  Pd.00g1223840.m01 10 TRYHGIR-CR-GGKWVSEIREPRK---TRRIWLGTYPTPEMAASAYDVAALALKG 59
                       589***9.55.7*********843...5***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MASSSCGKQT RYHGIRCRGG KWVSEIREPR KTRRIWLGTY PTPEMAASAY DVAALALKGG  60
DAVLNFPSSI ASYPSNEEAN NSLELKESPK KQEDDVTTMM NSTSLASSVG IDEEELFGMP  120
NLLAEMAEGM LLSPPRPPDY PESGNSDGGE SDGCDQTNGV CLYRETEYAS L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.19e-34ERF family protein