PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1227490.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 618aa MW: 70060.5 Da PI: 9.0275

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1227490.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	51.1	4.4e-16	72	162	1	72
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...................tekerrtraetrtgCkaklkvkkek 72 +fY+eYAk+vGF ++++s++s+ +g++++++f C+++g+++e++++ +++ r +r+ ++t+Cka+++vk++ Pd.00g1227490.m01 72 SFYREYAKSVGFAAVIKASRRSRVSGKFIDAKFACTRYGNKRESSTAevpesvsnsressicssvkRKRGRASRSWEKTDCKACMHVKRNF 162 5***************************************999999***********998888899**************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 618 aa Download sequence
MIKIRGEENH RAIVSVTNGP VNDKENAGQN VNGRVSDTRN KTVTRDEINL NSSRDSEPRD 60 GMEFESKEEA FSFYREYAKS VGFAAVIKAS RRSRVSGKFI DAKFACTRYG NKRESSTAEV 120 PESVSNSRES SICSSVKRKR GRASRSWEKT DCKACMHVKR NFDLGTGDAD GLHAIRRRTK 180 KMYVNMARQS GGYKKSDNQK DREQWIPTYM RDIFLAGMST TQRSESINSF FDKYMQRKTT 240 LKEFLEQYKT ILREKYEEEV KADFETWHKQ PALRSPSPFG KQMATMYTHA IFKKFQVEVL 300 GVVACHPKKE TEDGAIKTFR VQDFEEDQDF VVAWNEMTSD ISCFCHSFEF NGFLCRHVMI 360 VLQMSGVHSI PSQYILKRWT KDAKNRQTLR EGSASVDCRV KRYNDLCERA FKLSDEGSLS 420 QESYNIAFNA LEEALRSCES INNSIQSVIE PISGETHGSE GVNQGNSKNK TNKKNGASKK 480 GQVQSEPEVI TIGVQESWQQ VEQLVSRAPT LDGYFGSQQI VQGTGQPSTI ASSRDQYYSN 540 QHMQGLGQLN SIAPIHDAHY IIQQRLHGVG QLHFRPQSIP SCFDIPDGLQ VTDQSTVGPT 600 QLHGLASRHL HSKDLSRQ

Sequence ? help Back to Top

Protein Sequence Length: 618 aa Download sequence

MIKIRGEENH RAIVSVTNGP VNDKENAGQN VNGRVSDTRN KTVTRDEINL NSSRDSEPRD  60
GMEFESKEEA FSFYREYAKS VGFAAVIKAS RRSRVSGKFI DAKFACTRYG NKRESSTAEV  120
PESVSNSRES SICSSVKRKR GRASRSWEKT DCKACMHVKR NFDLGTGDAD GLHAIRRRTK  180
KMYVNMARQS GGYKKSDNQK DREQWIPTYM RDIFLAGMST TQRSESINSF FDKYMQRKTT  240
LKEFLEQYKT ILREKYEEEV KADFETWHKQ PALRSPSPFG KQMATMYTHA IFKKFQVEVL  300
GVVACHPKKE TEDGAIKTFR VQDFEEDQDF VVAWNEMTSD ISCFCHSFEF NGFLCRHVMI  360
VLQMSGVHSI PSQYILKRWT KDAKNRQTLR EGSASVDCRV KRYNDLCERA FKLSDEGSLS  420
QESYNIAFNA LEEALRSCES INNSIQSVIE PISGETHGSE GVNQGNSKNK TNKKNGASKK  480
GQVQSEPEVI TIGVQESWQQ VEQLVSRAPT LDGYFGSQQI VQGTGQPSTI ASSRDQYYSN  540
QHMQGLGQLN SIAPIHDAHY IIQQRLHGVG QLHFRPQSIP SCFDIPDGLQ VTDQSTVGPT  600
QLHGLASRHL HSKDLSRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	1e-132	FAR1 family protein