PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1227820.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 512aa MW: 59848.7 Da PI: 8.9052

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1227820.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	50.7	6.1e-16	1	70	58	127
NAM 58 wyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapk.gektdWvmheyr 127 +yfF++ ++k + ++ ++r++++gyW t k +++ + ++e +g+kk+L fy gr+++ ++kt+W+m ey Pd.00g1227820.m01 1 MYFFTRVERKFTDSTLPRRKARNGYWIPTSKYENIEQ-GTEIIGVKKSLRFYAGRHRNaSTKTNWTMLEYI 70 5********************************99.999*******997665157*******6 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MYFFTRVERK FTDSTLPRRK ARNGYWIPTS KYENIEQGTE IIGVKKSLRF YAGRHRNAST 60 KTNWTMLEYI AGGTASAAVS QSHYFLYDWV LCKVYEEELS AKKVPESNNQ ENAADEEVTG 120 EQLHPHIRTS PLEDLFGAKK RRRLSKNSGQ LPLTICTSSY RRPCLPELPF EVIIEILSRL 180 PVESVLRFKC VCRQWCSTFQ EEDFIAKHWV RASPLRLPYR YIWNYNNSVS FYEENFKLIG 240 NSCGLFLEKN YSSQVFRIRN FAMHQVLYLP HAPNAYINTM CFVLNLSTGE CKVAHFYIKG 300 NLDSEVGLKV LTVGIDCQWR PLKLSNETIW GQHEKDLLKR HILKPNQTEG AAHYVEIIRA 360 GQDLYLEVQS FDFRTECFVT TRLPERVFGN LEKVFVFRWN HHLAVGEIVE EALNILVLED 420 FKDHKWSENK IVVPYKFLKD NPSLKNQIWA PVRVIYGKLE LQGVKSFLTY DMEREIITRI 480 EVGNDPDKEH FASHKPSLLT FKGMRPKRVR CD

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MYFFTRVERK FTDSTLPRRK ARNGYWIPTS KYENIEQGTE IIGVKKSLRF YAGRHRNAST  60
KTNWTMLEYI AGGTASAAVS QSHYFLYDWV LCKVYEEELS AKKVPESNNQ ENAADEEVTG  120
EQLHPHIRTS PLEDLFGAKK RRRLSKNSGQ LPLTICTSSY RRPCLPELPF EVIIEILSRL  180
PVESVLRFKC VCRQWCSTFQ EEDFIAKHWV RASPLRLPYR YIWNYNNSVS FYEENFKLIG  240
NSCGLFLEKN YSSQVFRIRN FAMHQVLYLP HAPNAYINTM CFVLNLSTGE CKVAHFYIKG  300
NLDSEVGLKV LTVGIDCQWR PLKLSNETIW GQHEKDLLKR HILKPNQTEG AAHYVEIIRA  360
GQDLYLEVQS FDFRTECFVT TRLPERVFGN LEKVFVFRWN HHLAVGEIVE EALNILVLED  420
FKDHKWSENK IVVPYKFLKD NPSLKNQIWA PVRVIYGKLE LQGVKSFLTY DMEREIITRI  480
EVGNDPDKEH FASHKPSLLT FKGMRPKRVR CD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	140	144	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	7e-16	NAC family protein