PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1229520.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 399aa MW: 44534.2 Da PI: 4.3459

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1229520.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	80	5e-25	9	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 +p Gf+FhP+d+el+ +yL +kv g++++ ++v++e+++y ePwd+ + k ++ +++yfF+k + + +g+r r++ +g Wk Pd.00g1229520.m01 9 VPIGFKFHPSDDELLRYYLLNKVCGTPFKYSNVVPEFNLYGRkEPWDIWNdfggqK-LEKGEDLYFFTKLKLVTGKGSRVARTIGNGSWKGE 99 589*************************9***99654975345422.3356789**********************99 PP NAM 87 gkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++v + k++ gl k + + + +++ ++ W+mhey+l Pd.00g1229520.m01 100 DRGTKVRDPakKNTPLGLCKRFRYEN--DKSDQHGCWIMHEYSL 141 9999999886566679*99984..4444699*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MAPCEYVDVP IGFKFHPSDD ELLRYYLLNK VCGTPFKYSN VVPEFNLYGR KEPWDIWNDF 60 GGQKLEKGED LYFFTKLKLV TGKGSRVART IGNGSWKGED RGTKVRDPAK KNTPLGLCKR 120 FRYENDKSDQ HGCWIMHEYS LHRSLVKPHS NSNTCGGDVL QSPTKILRQL ENSDEVVLGA 180 NFTPISEASE VNYHYNQQPE QTTTTRTGAN AYLPMNQPHY FLTDYPTTRA SASTTPPPSL 240 PQPDYGFELI SDTDHQPAQG FNYDLSQFLD DDDVETLMKD LSNLDNIQPL AAQPLGGGSH 300 PYPSIIQEAA VDEDSGNINS GFGISSEDQT GGELGTENVQ LNVLGFPVHD NEMLDFLNRA 360 SFDDLVDMIQ FDDNDDELQA FAMSQSVMGM ESTTTAATC

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MAPCEYVDVP IGFKFHPSDD ELLRYYLLNK VCGTPFKYSN VVPEFNLYGR KEPWDIWNDF  60
GGQKLEKGED LYFFTKLKLV TGKGSRVART IGNGSWKGED RGTKVRDPAK KNTPLGLCKR  120
FRYENDKSDQ HGCWIMHEYS LHRSLVKPHS NSNTCGGDVL QSPTKILRQL ENSDEVVLGA  180
NFTPISEASE VNYHYNQQPE QTTTTRTGAN AYLPMNQPHY FLTDYPTTRA SASTTPPPSL  240
PQPDYGFELI SDTDHQPAQG FNYDLSQFLD DDDVETLMKD LSNLDNIQPL AAQPLGGGSH  300
PYPSIIQEAA VDEDSGNINS GFGISSEDQT GGELGTENVQ LNVLGFPVHD NEMLDFLNRA  360
SFDDLVDMIQ FDDNDDELQA FAMSQSVMGM ESTTTAATC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17260.1	2e-18	NAC family protein