PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1233350.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CPP

Protein Properties

Length: 441aa MW: 48761.1 Da PI: 7.7242

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1233350.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	52.7	8.7e-17	15	52	3	40
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+CnCkk+kClk+YC+Cfaag++C+e+C C++C+N + Pd.00g1233350.m01 15 TKRCNCKKTKCLKLYCDCFAAGVYCAESCACQGCFNIT 52 699*********************************76 PP
2	TCR	51.6	1.9e-16	92	130	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks ClkkYCeC++a++ Cs+ C+C++CkN Pd.00g1233350.m01 92 RHKRGCNCKKSMCLKKYCECYQANVGCSSGCRCDGCKNV 130 589***********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MIRKKTSSTK DSDGTKRCNC KKTKCLKLYC DCFAAGVYCA ESCACQGCFN ITDYEDTVLE 60 TRQHIESRNP LAFAPKIVQH EEEVQFTPSS ARHKRGCNCK KSMCLKKYCE CYQANVGCSS 120 GCRCDGCKNV YGRKGEYIPI EHGVGKDNVS DKAGKERIES TFDEKLEMVA TKKDILSTEL 180 YDSHNLTPLA PSFQCSDHEN NVPKSPCLPT SYLPSPESDL TIISSYEKST RSPLRHSESS 240 DILLETSKEL SDLGSYNWRV DYDNIGIADT FSPRCDAAPT TCHITPMSDL CSMAMVSSAS 300 SKTIGWTNAS QVQLCPGSHS LSSDSSLHRR SSPVTPMTRL GGTKSCQGLD FENGLYDILQ 360 DDTPEILKDS STPIRSLKVS SPNKKRVSPP HSHNHELGAS SSGALRSGRK FILKAKEMID 420 IYGVHVYFKV SLVFTFPTWA Q

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MIRKKTSSTK DSDGTKRCNC KKTKCLKLYC DCFAAGVYCA ESCACQGCFN ITDYEDTVLE  60
TRQHIESRNP LAFAPKIVQH EEEVQFTPSS ARHKRGCNCK KSMCLKKYCE CYQANVGCSS  120
GCRCDGCKNV YGRKGEYIPI EHGVGKDNVS DKAGKERIES TFDEKLEMVA TKKDILSTEL  180
YDSHNLTPLA PSFQCSDHEN NVPKSPCLPT SYLPSPESDL TIISSYEKST RSPLRHSESS  240
DILLETSKEL SDLGSYNWRV DYDNIGIADT FSPRCDAAPT TCHITPMSDL CSMAMVSSAS  300
SKTIGWTNAS QVQLCPGSHS LSSDSSLHRR SSPVTPMTRL GGTKSCQGLD FENGLYDILQ  360
DDTPEILKDS STPIRSLKVS SPNKKRVSPP HSHNHELGAS SSGALRSGRK FILKAKEMID  420
IYGVHVYFKV SLVFTFPTWA Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	3e-56	CPP family protein