PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g123470.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 529aa MW: 59440.5 Da PI: 5.3543

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g123470.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	36.9	6.4e-12	17	108	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefel 92 ffk+ +++ r+ +p +f+ ++g++ s + l+ ++g ++e++l r++ ++ +++ kGW eF k L+ g +vF ++g+s+f Pd.00g123470.m01 17 FFKII--LEDSSKIRIKIPTRFLMKYGEN--LSSPVNLKLPNGAEMEIEL--RRCNNGgVWFDKGWPEFSKFCSLDYGSWLVFGYEGNSNF-- 101 56666..56677788*********977..66679999*******..55555559***********************9999.. PP EEEEE-S CS B3 93 vvkvfrk 99 +v +f++ Pd.00g123470.m01 102 HVLIFDR 108 ***98 PP
2	B3	53.1	6e-17	260	352	4	99
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 v +++ + k++ l +p fa++h ++++ + + l+ ++gr+W+vk++y+k+ r ++ GW +Fv++n+Lk+ D++vF+l+++ + ++ v + Pd.00g123470.m01 260 VVMQPWYVKQSFLPMPPGFAKRHLIEHPAG-NVFLRVSDGRTWSVKFKYEKSIAR--FQYGWLGFVRDNNLKVDDVCVFSLIEDVKLSFDVVF 349 44566666666799*******4444444.7***********77777655..99*********************99888888888 PP E-S CS B3 97 frk 99 fr+ Pd.00g123470.m01 350 FRT 352 876 PP

Sequence ? help Back to Top
Protein Sequence Length: 529 aa Download sequence
MASLRNPPTF SASIPHFFKI ILEDSSKIRI KIPTRFLMKY GENLSSPVNL KLPNGAEMEI 60 ELRRCNNGGV WFDKGWPEFS KFCSLDYGSW LVFGYEGNSN FHVLIFDRTA TEIEYPKPEM 120 EETDSEEEEE EQDDADDGSV EILDVCEEEE EEQDDADDES VEILDVFPPC QRKAREKSPL 180 PCPQPHKKMR TRSSGMMLEE SLRNKASDCS KSEMKRDKSP LVPSEVKDSV GRMHISTTSG 240 KAVALQRAIA FKSVNPSFRV VMQPWYVKQS FLPMPPGFAK RHLIEHPAGN VFLRVSDGRT 300 WSVKFKYEKS IARFQYGWLG FVRDNNLKVD DVCVFSLIED VKLSFDVVFF RTTEEAANCP 360 LSPGRHDFPT KKGGGGTSIY RTKKGGGGTS SNRTGKATAL DRANAFRSQN PSSFIVSIRP 420 SYINGRWRLW LPSKFYKLSP SIKHSCEVIL QVSNGRTWSV GLSKGRPRFT HGAKCTNDGE 480 QIVPTKEETD NEDVDSSDDS SNDSSDDSGD DLSDDSGIRI LSESSSTNV

Sequence ? help Back to Top

Protein Sequence Length: 529 aa Download sequence

MASLRNPPTF SASIPHFFKI ILEDSSKIRI KIPTRFLMKY GENLSSPVNL KLPNGAEMEI  60
ELRRCNNGGV WFDKGWPEFS KFCSLDYGSW LVFGYEGNSN FHVLIFDRTA TEIEYPKPEM  120
EETDSEEEEE EQDDADDGSV EILDVCEEEE EEQDDADDES VEILDVFPPC QRKAREKSPL  180
PCPQPHKKMR TRSSGMMLEE SLRNKASDCS KSEMKRDKSP LVPSEVKDSV GRMHISTTSG  240
KAVALQRAIA FKSVNPSFRV VMQPWYVKQS FLPMPPGFAK RHLIEHPAGN VFLRVSDGRT  300
WSVKFKYEKS IARFQYGWLG FVRDNNLKVD DVCVFSLIED VKLSFDVVFF RTTEEAANCP  360
LSPGRHDFPT KKGGGGTSIY RTKKGGGGTS SNRTGKATAL DRANAFRSQN PSSFIVSIRP  420
SYINGRWRLW LPSKFYKLSP SIKHSCEVIL QVSNGRTWSV GLSKGRPRFT HGAKCTNDGE  480
QIVPTKEETD NEDVDSSDDS SNDSSDDSGD DLSDDSGIRI LSESSSTNV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49475.1	1e-19	B3 family protein