PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1236740.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 202aa    MW: 22734.8 Da    PI: 7.5492
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1236740.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.81.4e-16114197190
                        EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                        f+k +++s+v+   +l lp +f++++  k  ++  +tl de+g + +  +    ++++  l++GW++F+ a++L +gD +vF+l++ ++f
  Pd.00g1236740.m01 114 FVKPMLQSHVTGGFWLGLPIHFCNKNLPK--RDESVTLVDEDGDECQTVY--LANKRG--LSGGWRGFAIAHELVDGDALVFQLIRPKTF 197
                        89*********************999433..4457***************..555555..9***********************987766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MVAAKLSYEE SRRQRMDENK KRMEALNLPQ LVQALKAPSF PKPTPMKRAK PDSREADGCG  60
EEIAVDPLRM PRRHSTSKHR DFSNRVYASD EARAEATERA EELESGLGSD HPTFVKPMLQ  120
SHVTGGFWLG LPIHFCNKNL PKRDESVTLV DEDGDECQTV YLANKRGLSG GWRGFAIAHE  180
LVDGDALVFQ LIRPKTFKVI DC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.13e-61B3 family protein