PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1237050.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 236aa    MW: 26069.4 Da    PI: 9.1687
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1237050.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.21.4e-08144184954
                        HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                         r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  Pd.00g1237050.m01 144 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 184
                        699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MDKISELCGA YNDVSDLPPS DHTFSTITTT TTSPNSITSN TSMPHYTEQQ NPQNIPSPNC  60
QSFLNLPTIP STISFSNTTN LTDQTSNSSN GFLPSSQKRT SMAAMREMIF RIAAMQPIHI  120
DPESVKPPKR RNVKISKDPQ SVAARHRRER ISERIRILQR LVPGGTKMDT ASMLDEAIHY  180
VKFLKSQVQT LERAAADRPT GIGFPVAMSS GSYGLHSVAK AYQAFCHENV QHFGDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.17e-43bHLH family protein