PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1237610.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family LBD
Protein Properties Length: 128aa    MW: 14326.5 Da    PI: 6.3325
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1237610.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26094.61.1e-2981091101
             DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlk 91 
                        +C aCk+l+++C+k+C++apyf +e+   +f  +h +FGas+++++l+ lp +e   a  ++++ A+ara dP+yG+v+ il+lq+++ + +
  Pd.00g1237610.m01   8 PCGACKFLKKRCKKGCIFAPYFMHEEaIMDFSSIHNVFGASKMSRILSMLPISECVVASWTMTFDAHARAVDPIYGCVSYILDLQEHVLNIQ 99 
                        7*********************9998469*************************************************************** PP

             DUF260  92 aelallkeel 101
                        a+l++++e+l
  Pd.00g1237610.m01 100 AQLDEAHEQL 109
                        *****99985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    
MSSRTFNPCG ACKFLKKRCK KGCIFAPYFM HEEAIMDFSS IHNVFGASKM SRILSMLPIS  60
ECVVASWTMT FDAHARAVDP IYGCVSYILD LQEHVLNIQA QLDEAHEQLA RAVAPIANPN  120
QDLENSNE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58190.13e-41LBD family protein