PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1238500.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 231aa    MW: 24555.6 Da    PI: 4.0968
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1238500.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP241.33.7e-1310471555
                AP2 15 WvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                       ++AeIrdps+   + r++lg+f+taeeAa a+++a+++++g
  Pd.00g1238500.m01 10 YAAEIRDPST---KERHWLGTFDTAEEAALAYDRAARSMRG 47
                       89*****965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MDDSLLARVY AAEIRDPSTK ERHWLGTFDT AEEAALAYDR AARSMRGSKA RTNFVYSDMP  60
HGSSVTSIIS PDESQHDMSA FFATPLQPQP QTTNHQQSFF TQDPFDAYPY SGGSSGGFGS  120
GSYGPVSGGD EPGSGSGSGS QSHTDLPPLP PCVSSTCYGP DGVMGSDMDM GYFGFSEHPT  180
NNGLDPMMSG SYMGFDSNEF VQHSPLFGSM PPVSDAGIDG FDLGSSSAYF Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28160.18e-26ERF family protein