PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1240470.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 242aa    MW: 28268.9 Da    PI: 7.3394
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1240470.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR174.32.6e-2349136290
               FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                         Yn+YA++vGFsvr+ +++++ +++   +  + Cskeg+r +++ + e ++ ++ etrtgCka+++   ++ d++w+v+ ++ eHnHela
  Pd.00g1240470.m01  49 LYNNYATRVGFSVRRGQKRYN-TKKVLRQFSYLCSKEGFRLDSDPS-ELSKVSKLETRTGCKASIRFAFQDeDDTWKVSYFVPEHNHELA 136
                        7****************9998.66779999************9999.99999****************9999****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MMLWPVFIDV ESDEENVREK DPMIVNRVEN IYEDLLGRVV STEEEAYNLY NNYATRVGFS  60
VRRGQKRYNT KKVLRQFSYL CSKEGFRLDS DPSELSKVSK LETRTGCKAS IRFAFQDEDD  120
TWKVSYFVPE HNHELAKPEE RQFLRSNRKV SDSNLGVIKT MVGAGIRTTN TYSYLAEEVG  180
GSQNVGFTKR DCYNVVNKEK MAMIEARDAQ SLMNLFKRKQ AEDPMFFYTV QVDQENRMTK  240
NF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-30FAR1 family protein